About me

Hello everyone! I am Semiramis, a Data Scientist who codes in Python, R, and Bash. During my PhD I developed automated solutions for data cleaning, analysis and visualization in Microbiology Research. I would like to apply my research and programming skills in an enterprise or start-up as a Data Scientist.

R and Python Talks

Advanced R Bookclub. Chapter 8: Conditions

JUL-2020, R-Ladies Netherlands (on-line)

 Slides

Talk & exercises about errors, warnings, and messages; how to handle them, and how to create custom condition objects.

Introduction to the Python libraries argparse, SeqIO and NetworkX

OCT, 2019, PyLadies Mexico City

 Slides (in Spanish)

Examples with Python modules argparse for passing named command-line arguments, SeqIO to load and read biological data (genomic sequences), and NetworkX for the analysis of biological networks.

Case study: visualization of genomics data in R

JUN, 2017, Sciences School, National Autonomous University of Mexico (UNAM)

 Slides (in Spanish)

Example on the use of R to visualize genomics data, suitable for heatmap or colored matrix representation in R with the ComplexHeatmap package.

Using the hypergeometric test in R

MAR, 2016, Sciences School, National Autonomous University of Mexico (UNAM)

 Slides (in Spanish)

Introductory talk and use cases for the hypergeometric tests, like enrichment (over-representation) or depletion of a group. Short exercises with R.

Antibiotic resistance talks

FEB-JUL, 2019, Center for Genomic Sciences, National Autonomous University of Mexico (UNAM)

Introduction to antibiotic resistance

 Slides (in Spanish)

Antibiotics that target the cell wall I

 Slides (in Spanish)

Antibiotics that target the cell wall II

 Slides (in Spanish)

Antibiotics that inhibit translation

 Slides (in Spanish)

Antibiotics that inhibit folate synthesis, adjuvants & heteregeneity

 Slides (in Spanish)

Antibiotics resistance barriers and fitness cost

 Slides (in Spanish)

Resistome and Microbiome

 Slides (in Spanish)

Research

You can see the scientific papers that I co-authored at  Google Scholar

Contact

Let’s keep in touch! You can find me on  github and  twitter
* Website built with R Markdown